Insertion junction: CLIP2.072208_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.072208
Chromosome:chromosome 6
Location:8775125
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre06.g311000 FBT2 (1 of 4) PTHR31585:SF0 - FOLATE-BIOPTERIN TRANSPORTER 1, CHLOROPLASTIC; putative folate/pteridine transporter 2 outside_mRNA
Cre06.g311050 (1 of 1) K00167 - 2-oxoisovalerate dehydrogenase E1 component beta subunit (BCKDHB, bkdA2) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGAGCTGATGGAACCGGTACCTCTCTGGACCCGGTCTCAAGATTTCAG
Internal bar code:ATACCGGAAAGGTACAGGCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:750
LEAP-Seq percent confirming:20.7792
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:61
LEAP-Seq n unique pos:77

Suggested primers for confirmation by PCR

Suggested primer 1:CTGAAGTCACTTGAGCCGGT
Suggested primer 2:GTTGCTAAGGCGCTGTATGC