Insertion junction: CLIP2.072209_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.072209
Chromosome:chromosome 9
Location:6422473
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g414900 ELG33,ELG41,ELG32 (1 of 2) PTHR11062//PTHR11062:SF89 - EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED // SUBFAMILY NOT NAMED; Exostosin-like glycosyltransferase 41 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTCAGTCACACCATCGTGACCCAGCCCACCCCGTGTTTAACTCTCTTT
Internal bar code:ATAGAGATATTTTGGTGTAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:3562
LEAP-Seq percent confirming:45.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTGTTCTGTGAGTGCGGT
Suggested primer 2:TACGGGACCGATGATGCAAG