Insertion junction: CLIP2.072211_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.072211
Chromosome:chromosome 3
Location:6353675
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g192400 (1 of 1) IPR013769 - Band 3 cytoplasmic domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTTGAAGACTTGCAGTGGTTTCATCTCTTTCCTAAGGGAAAATGGACG
Internal bar code:ACACTATCATGCGGACGAGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3222
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:84
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:88

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGGCACAAGTGTACTGGT
Suggested primer 2:GCAATCATGGTGATGACCGC