Insertion junction: CLIP2.072211_4

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.072211
Chromosome:chromosome 3
Location:6353676
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g192400 (1 of 1) IPR013769 - Band 3 cytoplasmic domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGGGCACGCCTCGTTCACACGATCAAGCCTGTGCTGTATTGTACTTCC
Internal bar code:AGTTTTGGTAGTTTGCGACCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2008
LEAP-Seq percent confirming:90.3226
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:GCAATCATGGTGATGACCGC
Suggested primer 2:CTCGGCACAAGTGTACTGGT