Insertion junction: CLIP2.072216_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.072216
Chromosome:chromosome 1
Location:240229
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre01.g001501 RAA11,OPR1 psaA mRNA trans-splicing factor of subcomplex I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTCCCACCCATTGCCCACTAACCCACCACCCCACAAAGACCCATCGGGC
Internal bar code:GGCACCTTTCGCTTCAGGCCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:119
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:TGCATGTGCCTGAGAGGAAG
Suggested primer 2:GGTCAATTGAAGGGCGGGAT