Insertion junction: CLIP2.072217_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.072217
Chromosome:chromosome 9
Location:888390
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g403400 (1 of 3) PF13637//PF13920 - Ankyrin repeats (many copies) (Ank_4) // Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_3) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATGTGCACCCCTGGACCACAGACCAATGTATGAACGTTACAATGTATGT
Internal bar code:AGTTGGGTACACTACCCTAAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1176
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCTAGAGGATTCCCTGCT
Suggested primer 2:GCAGGCTGAGTGTCAAGCTA