Insertion junction: CLIP2.072228_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.072228
Chromosome:chromosome 7
Location:1082424
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g320150 ERJ1 DnaJ-like protein, ER-targeted; (1 of 1) K09517 - DnaJ homolog subfamily B member 11 (DNAJB11) 5'UTR
Cre07.g320200 (1 of 1) PTHR23244:SF208 - F14M2.9 PROTEIN-RELATED outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGGTCTCCGAAATTGCGTGAGCCCGGTTATATGTACACGGTGTCCAAA
Internal bar code:ACGTAGATCATAGGACAGCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:751
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGACCTGGGCTTGGATCC
Suggested primer 2:GTTGAACAGGTCGTTGCCAC