Insertion junction: CLIP2.072232_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.072232
Chromosome:chromosome 12
Location:3137748
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g500700 LCL2 (1 of 125) IPR001841 - Zinc finger, RING-type; Long-chain-fatty-acid-CoA ligase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTTTATCCATTTGCATAATTCGACGCTAAAATACATACCTTGCCACCG
Internal bar code:TGTACTTGCGCACGGCTCACTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2121
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCGCACGTAACTTATGTG
Suggested primer 2:CTGCTGTTTTTCCGCTGCTT