Insertion junction: CLIP2.072234_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.072234
Chromosome:chromosome 17
Location:2585936
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre17.g716301 SUM7 Similar to Small ubiquitin-like modifier; (1 of 4) PF03171//PF11976 - 2OG-Fe(II) oxygenase superfamily (2OG-FeII_Oxy) // Ubiquitin-2 like Rad60 SUMO-like (Rad60-SLD) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGTGGGCGCGGCGGCCGGGCTGCCAGCCTGCTCATCCGCCGCCTCAGG
Internal bar code:GCGCAGCCTGTCTTTTTCCTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:585
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTTACCGTACAGTTGCGT
Suggested primer 2:AAACTCGACTGACACGACCC