Insertion junction: CLIP2.072270_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.072270
Chromosome:chromosome 16
Location:1976923
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g656433 TNP41,CSB59 (1 of 70) PF07282 - Putative transposase DNA-binding domain (OrfB_Zn_ribbon); {"Probable transposon-derived protein of Chlamydomonas-Specific family B 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCGAGCTTGTGTCTCCACCATCAAAGCCTAGGAAGACAGTCTTGGCCGC
Internal bar code:TGTTATCGCGAAGCAAATTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:756
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTTGCAGACTTTGACCGA
Suggested primer 2:GTTCGGCCTCAGACTGTGAA