Insertion junction: CLIP2.072274_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.072274
Chromosome:chromosome 17
Location:1135350
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g704050 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCGTCAGAAAGCTCCTTGCAATTGTGGATGAGATGGAATGCAAGATAT
Internal bar code:GTAGAGTATTACGTCTGGTAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1255
LEAP-Seq percent confirming:94.2857
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGCTGGAAAGAAAGGACG
Suggested primer 2:GTTGAGCGAGTTCAGTGGGA