Insertion junction: CLIP2.072276_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.072276
Chromosome:chromosome 10
Location:846734
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g801109 (1 of 9) IPR011011//IPR013083 - Zinc finger, FYVE/PHD-type // Zinc finger, RING/FYVE/PHD-type 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAAACGCAGCTTCAGCAAAATCTACAGCCTGCCCGACTCCCGGCGTGT
Internal bar code:ATGCTATCGGTGCTAGTGGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3396
LEAP-Seq percent confirming:28.5714
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:50
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGTGACAAACAGGGGCAA
Suggested primer 2:AGGTCGGTGCTAAGTTTGGG