Insertion junction: CLIP2.072283_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.072283
Chromosome:chromosome 11
Location:559629
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467603 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTAATTCTATTATCCGCTTGTAAGCCTGCGGGCGTGCGGGTCAAGGCGT
Internal bar code:TATGTTATAGTGGACATTATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3405
LEAP-Seq percent confirming:73.3333
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GGAACTTGCCGTCCTCAAGA
Suggested primer 2:GTAACCCTCGAACCTGTGCA