Insertion junction: CLIP2.072287_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.072287
Chromosome:chromosome 12
Location:6561197
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g538300 FAP247,LF5 Flagellar Associated Protein 247; (1 of 18) K08824 - cyclin-dependent kinase-like [EC:2.7.11.22] (CDKL) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGTCACCGCGGACACATATCGACTATCTTAAACCGATAATCTGAATTT
Internal bar code:CTTGTGATAGTCAACTCCTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2437
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CACCCTTACCGTCGCTTTCT
Suggested primer 2:GTGCCAAGTGGTGCTTTGAG