Insertion junction: CLIP2.072291_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.072291
Chromosome:chromosome 7
Location:6117950
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre07.g355650 AMT1F,AMT6 Ammonium transporter; (1 of 8) K03320 - ammonium transporter, Amt family (amt, AMT, MEP) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTGCTGTGAGCACACCGCCACTACCTGCCGCCTCAGCTGGAGCCCGGT
Internal bar code:TATAGGAAATTCAGGTCGATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:95
LEAP-Seq percent confirming:12.5
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CACCACTTCGTCTGCAGTCT
Suggested primer 2:CGTTCACTCCGTTCTCCACA