Insertion junction: CLIP2.072291_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.072291
Chromosome:chromosome 16
Location:3779786
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g685929 3'UTR
Cre16.g686285 (1 of 21) IPR011016 - Zinc finger, RING-CH-type 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACAATCACGAAGAGGGGAACCTGACTACGCTTACACAGACACGCTGCA
Internal bar code:TTGAAGAACGGGAACCTTTCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:803
LEAP-Seq percent confirming:5.71429
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:GCTAGCTGCGTGTATTGCAC
Suggested primer 2:TTCGAGTGAGTGACTTGGCC