Insertion junction: CLIP2.072291_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.072291
Chromosome:chromosome 16
Location:3779787
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g685929 3'UTR
Cre16.g686285 (1 of 21) IPR011016 - Zinc finger, RING-CH-type 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTACAAGAAGGGACAACCTGGGACAACTCGAGCGTGCTAGCACGCTGCG
Internal bar code:CTAGACCCTGGCCTAGGGGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2476
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:TTCGAGTGAGTGACTTGGCC
Suggested primer 2:GCTAGCTGCGTGTATTGCAC