Insertion junction: CLIP2.072292_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.072292
Chromosome:chromosome 7
Location:2977322
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre07.g333100 3'UTR
Cre07.g333150 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGACTCCTGGAGATTGGATGGCCTCACAGGTGCATCAGCTTCCAGCCAGA
Internal bar code:GTGGCGATCGGTGCAGTGTGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2089
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGTACATATCACGCGTCC
Suggested primer 2:CTGCCTGTGTTGCTTGTTCC