Insertion junction: CLIP2.072294_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.072294
Chromosome:chromosome 8
Location:4441280
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g385600 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGCTGAGCCTGGACTCTCGGCGTAGTTTAGGGGCCCCTGTGCGCACGC
Internal bar code:GGGTTAACGACGCGGTTATTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1224
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CCCATCTTTTCCCCTTCCCC
Suggested primer 2:GTGTCAGCAGCTGTGTGTTG