Insertion junction: CLIP2.072304_6

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.072304
Chromosome:plastome
Location:6134
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGTTTTTGCCTGATAATTATATATATTATATTTATTTATGTACAAAATT
Internal bar code:CGTAGGCTACGAACACTTTTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:51
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CATACCGTCGTCCAATCGCT
Suggested primer 2:GTCCTGCCAAATGCCTAGGT