Insertion junction: CLIP2.072307_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.072307
Chromosome:chromosome 7
Location:111215
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g312850 (1 of 1) PTHR31621:SF1 - DUF679 DOMAIN MEMBRANE PROTEIN 1 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGTACCTGGGCCTGGATCCTGTACTGGGCATTTCCAGGCCGGAACCGG
Internal bar code:TATTACCAAGCTGGGGGCAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2499
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGTGAACGACGCGAAGAA
Suggested primer 2:TCAGCTGGTGGACTCGTAGA