Insertion junction: CLIP2.072341_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.072341
Chromosome:chromosome 17
Location:5818270
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g741350 KIN7-4,KIN7D Kinesin motor protein; (1 of 4) K11498 - centromeric protein E (CENPE) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAACCGGGTGCTAGCAAATCACAAAGCCAGAAACCGCTGTAACGTTTTCA
Internal bar code:GAGTAGCTGCGCCAATAATCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1834
LEAP-Seq percent confirming:96.9697
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTGACTCCGTTGACCAGA
Suggested primer 2:CGCCGGGCTTTACTATAGCA