Insertion junction: CLIP2.072346_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.072346
Chromosome:chromosome 11
Location:3233535
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g476200 NZF1 (1 of 19) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH); CCCH-type zinc finger protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTCATTAACCGCGTGCACATACATCTTGCGCCCCACCAGGCCTCATGG
Internal bar code:ACCGCGAGGCAGCTACTTGCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2389
LEAP-Seq percent confirming:98.2759
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:CATGCTTCGTTGATGAGCCG
Suggested primer 2:GCTCATAGAGTTTGCTGCGC