Insertion junction: CLIP2.072348_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.072348
Chromosome:chromosome 11
Location:739703
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467627 (1 of 1) 1.14.13.134 - Beta-amyrin 11-oxidase / CYP88D6 3'UTR
Cre11.g467628 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATTTGCAAGCGCCTGAAGGTGTAAATAGGAGGCCAGGAAAATGTGTGGA
Internal bar code:ATGGCGAACGTTACCAGCTGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1144
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CACGCGGAATATTGGCTTGG
Suggested primer 2:GGTCGTGTCAAGCTCACAGA