Insertion junction: CLIP2.072351_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.072351
Chromosome:chromosome 6
Location:4703593
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g279050 (1 of 7) PTHR11584:SF381 - PROTEIN PQN-80, ISOFORM B 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCCGGTTCACCGTTCCCCAGGACTTCTGTCGTCGCCCTTCTCCATTCG
Internal bar code:TTACAGGACATTTCTAAAGACT

Confirmation - LEAP-Seq

LEAP-Seq distance:3823
LEAP-Seq percent confirming:98.9362
LEAP-Seq n confirming:93
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:94

Suggested primers for confirmation by PCR

Suggested primer 1:GGTTGCCCTACCTCTCACAC
Suggested primer 2:GACAGGCACGTTTTGAGCTG