Insertion junction: CLIP2.072351_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.072351
Chromosome:chromosome 6
Location:4703597
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g279050 (1 of 7) PTHR11584:SF381 - PROTEIN PQN-80, ISOFORM B 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGACTAGGTCGTTTTGTGGGGGCTGAGCCCTAAGGCCCCGGCCCTGGTT
Internal bar code:AGGGCCAACATACTGGCATGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1450
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GACAGGCACGTTTTGAGCTG
Suggested primer 2:GGTTGCCCTACCTCTCACAC