Insertion junction: CLIP2.072353_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.072353
Chromosome:chromosome 3
Location:335600
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144584 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATTGTTTCTTCAGGCTATCGTAGTGCGATGTCGAAATGGAAGTGGGCCG
Internal bar code:ATATGTTTCCTAATTGTGTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1840
LEAP-Seq percent confirming:70.3704
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:CTAGCAGCCAGGTATGACGG
Suggested primer 2:AGTCATGCCCAGCGATTTCA