Insertion junction: CLIP2.072358_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.072358
Chromosome:chromosome 2
Location:5746459
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g116750 ATP1A Mitochondrial F1F0 ATP synthase, alpha subunit; (1 of 1) K02132 - F-type H+-transporting ATPase subunit alpha (ATPeF1A, ATP5A1, ATP1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGACCGGGCTTGGCCGAAAGTACAACTACCGGGTGCCATGTTGACGATC
Internal bar code:GCACAGGAATGCGGGTTCCTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3899
LEAP-Seq percent confirming:61.6667
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGTGGTGCGTTCACAGTA
Suggested primer 2:CTGTCGGGGAGTTTTTCGGA