Insertion junction: CLIP2.072375_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.072375
Chromosome:chromosome 15
Location:807132
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre15.g637761 ABCD1 Peroxisomal long-chain acyl-CoA transporter, ABC superfamily; (1 of 1) K05677 - ATP-binding cassette, subfamily D (ALD), member 3 (ABCD3, PMP70) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCCGGCCGTGTGGGGGTTTACAGTCATGATTAACTAAGAAGTGAAGGC
Internal bar code:CTGGAGCATATAGCATTTTAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:186
LEAP-Seq percent confirming:81.25
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTGTTAGGGTGTGTGTGT
Suggested primer 2:ATGAGGTGTGTGTACGGCAG