Insertion junction: CLIP2.072379_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.072379
Chromosome:chromosome 5
Location:2192862
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g237500 (1 of 2) IPR027279 - D-aminopeptidase/lipoprotein domain 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGATCACATTGCCACCCTGTTCCCACTGCTTTGCAGGAGGTTGCTGGGCG
Internal bar code:TGCTTAATCTATTCTATCGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2718
LEAP-Seq percent confirming:82.1429
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTCTCGCCCAAAATAAGC
Suggested primer 2:CAGACAAGGGGAGCTTGAGG