Insertion junction: CLIP2.072402_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.072402
Chromosome:chromosome 10
Location:4164953
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g449000 VPT1,LZY1 LZY1B homolog 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGAAGTTATGAGTGTGCGGGGCTTCCAAGCGTCAGGGGCAGCGGCGTT
Internal bar code:AGGTGTCTTTCACAACTTCAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1182
LEAP-Seq percent confirming:4.54545
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:42
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCACAACATAGCGCCATG
Suggested primer 2:ATGCGTGACTGGAAGCTCAA