Insertion junction: CLIP2.072407_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.072407
Chromosome:chromosome 5
Location:115451
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g242200 (1 of 1) IPR001680//IPR002048//IPR011992//IPR015943//IPR017986//IPR020472 - WD40 repeat // EF-hand domain // EF-hand domain pair // WD40/YVTN repeat-like-containing domain // WD40-repeat-containing domain // G-protein beta WD-40 repeat 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTGAGTGCATGCTGCAGCGGGTGCCATTGCATTTTGCAACGGGTTGCA
Internal bar code:GATACTAAATTGTGGATTATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2923
LEAP-Seq percent confirming:98.8506
LEAP-Seq n confirming:86
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:87

Suggested primers for confirmation by PCR

Suggested primer 1:AAGTTTGGCAAGTCCCCCAA
Suggested primer 2:GCCTGTACACGACCATGTCA