Insertion junction: CLIP2.072423_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.072423
Chromosome:chromosome 9
Location:2017921
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre09.g396750 CSE18 Predicted protein of CSE family; (1 of 1) IPR000601//IPR022409 - PKD domain // PKD/Chitinase domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCCCGTGCTGATTTGCAGCATGCAGGGCGCAGAGCAGGAAGGGCTGAT
Internal bar code:GGTTAAGTTTAGATTGGTTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:751
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TCCGGGCTGGTTGTTATTCC
Suggested primer 2:GCCTAAACATGGACCGGACA