Insertion junction: CLIP2.072427_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.072427
Chromosome:chromosome 12
Location:5608335
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g531250 (1 of 1) K00480 - salicylate hydroxylase (E1.14.13.1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCACGCGAGATCGTGCCCACCCTGTTACCCCCGCTTGATTCGCGTGGTC
Internal bar code:ACCTAAGGTGGGTGGACTTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:5433
LEAP-Seq percent confirming:85.8407
LEAP-Seq n confirming:97
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:113

Suggested primers for confirmation by PCR

Suggested primer 1:ATGAAGTGAAGTGCCGACGT
Suggested primer 2:TGTATTAGGGCCATCCGTGC