Insertion junction: CLIP2.072428_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.072428
Chromosome:chromosome 13
Location:4585517
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g603450 (1 of 4) PF14159 - CAAD domains of cyanobacterial aminoacyl-tRNA synthetase (CAAD) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAATCCGCGACGTGTCACGGCGCCGGTGCCCCCACGCCACGCCACGCC
Internal bar code:GATCGTTGCCGAGACTGTTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1085
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTTCATCTCGTCACCCCT
Suggested primer 2:TACCCAACGCTTTCCTCACC