Insertion junction: CLIP2.072428_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.072428
Chromosome:chromosome 13
Location:4585519
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g603450 (1 of 4) PF14159 - CAAD domains of cyanobacterial aminoacyl-tRNA synthetase (CAAD) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTCTTGGGCCCAGAGGGGGGAGGTCATACGTGTGAACGAGGACGTGCA
Internal bar code:TTGGTTGGTATATTCGCGCTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1425
LEAP-Seq percent confirming:19.3548
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TACCCAACGCTTTCCTCACC
Suggested primer 2:TCCTTCATCTCGTCACCCCT