Insertion junction: CLIP2.072435_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.072435
Chromosome:chromosome 1
Location:2449511
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g014200 5'UTR
Cre01.g014250 OPR2 OctotricoPeptide Repeat protein 2 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTACACAAAGAATGACGGCAAAAGGCAGAGGATGCCGATGGTGGCTGGC
Internal bar code:TATAGAGTCCGCTCACGCTCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3335
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:TATGCTGCTGCCACTACCAC
Suggested primer 2:CTTGCGATTCTGGATGCAGC