Insertion junction: CLIP2.072446_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.072446
Chromosome:chromosome 8
Location:1577386
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre08.g365500 3'UTR
Cre08.g365550 (1 of 228) IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGACCCCGGGTACATTACACGTCCACTCCTCCACAAAGCACATCAACACC
Internal bar code:AGTGGTGTGTCTGGCCTGTACT

Confirmation - LEAP-Seq

LEAP-Seq distance:677
LEAP-Seq percent confirming:43.1034
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCATCGAGCATTCCTTGT
Suggested primer 2:ACGGCAGGGAAGAACTTCTG