Insertion junction: CLIP2.072447_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.072447
Chromosome:chromosome 9
Location:190272
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g800969 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCTGAATGGAGAGCGACAAACACTCTTGTTATACTCAAGGGAGTGGG
Internal bar code:TTAGAGGGATCTCGCGTGGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:3726
LEAP-Seq percent confirming:65.8228
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:79

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTCATGTTCGTTATGGGC
Suggested primer 2:CAGACACGAACACGACCTGA