Insertion junction: CLIP2.072448_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.072448
Chromosome:chromosome 12
Location:2532696
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g507001 3'UTR
Cre12.g507002 (1 of 38) IPR017448 - SRCR-like domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTCATGTCCGTACATATAAGACGAATTAAGGAATATAAGGCAATAAAC
Internal bar code:ACTTCATGGGATCTTGTTAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:503
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCCTTACCTGATCTACGC
Suggested primer 2:CACAGAGGCCTTGCAAAACC