Insertion junction: CLIP2.072458_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.072458
Chromosome:chromosome 12
Location:2544428
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801380 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTCACGAACTGCACGCGCGCCAACCACATCTCAACGGAATTCTACCGA
Internal bar code:TTGATAAGGAGGAGCCGCGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1658
LEAP-Seq percent confirming:4.7619
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CTTACCCACAGAGCCACCAG
Suggested primer 2:CATCCTTTATGCTGCCGTGC