Insertion junction: CLIP2.072461_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.072461
Chromosome:chromosome 16
Location:4777960
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g687750 GT90F28,GT90-28 GT90 family protein 28; (1 of 52) PF05686 - Glycosyl transferase family 90 (Glyco_transf_90) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCGGACACGTGCCCATCGCGCTCGCGGCCTTCAGGTTGCCGCCGTGTG
Internal bar code:TGGCGGTTGGGGCAGCAGAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2272
LEAP-Seq percent confirming:93.4211
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:AAACGTTATGTAGGGCGGCA
Suggested primer 2:CGTGTGCAGGAACCTGAGAT