Insertion junction: CLIP2.072463_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.072463
Chromosome:chromosome 7
Location:3474442
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g335800 PIH1D3,TWI1,DNAAF6,Twister Twister-like Dynein assembly factor; (1 of 1) PTHR21083//PTHR21083:SF0 - TWISTER // PROTEIN PIH1D3 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTAATCGTAAACGTACAACAGCCACAGTCCAGTGAACAAAGCAGAATGG
Internal bar code:TGATACTATATAATCAACTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:524
LEAP-Seq percent confirming:78.5714
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:AGCGTTTTAGGCTCCCTTCC
Suggested primer 2:CCAGGGTTGGGTCTTGAGAC