Insertion junction: CLIP2.072471_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.072471
Chromosome:plastome
Location:159811
Confidence (%):40
Locus systematic id Locus common name Defline Feature
CreCp.g802323 2717034,atpB,ChreCp058 (1 of 1) K02112 - F-type H+-transporting ATPase subunit beta (ATPF1B, atpD); ATPase beta chain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGTACCTGCAGATGACCTTACTGACCCTGCTCCTGCTACAACATTCGC
Internal bar code:TAGATCGCTAGGGAGCGGCTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:383
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTGAAGGGAAAGGTGCAA
Suggested primer 2:TGGTGCTGGTGTAGGCAAAA