Insertion junction: CLIP2.072478_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.072478
Chromosome:chromosome 10
Location:4224504
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g449350 (1 of 1) PTHR11717//PTHR11717:SF2 - LOW MOLECULAR WEIGHT PROTEIN TYROSINE PHOSPHATASE // PEPTIDYL-TRNA HYDROLASE PTRHD1-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTGCGATCGCCATGCAACTTCAAGAACATCGTTACCTGATTGCTATCC
Internal bar code:TCTCAAGTTTGTAGAGGATTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:596
LEAP-Seq percent confirming:69.2308
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TACAAGGACGAGCCCGAAAC
Suggested primer 2:GTCCTTCTGCTCGCTTGAGT