Insertion junction: CLIP2.072478_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.072478
Chromosome:chromosome 10
Location:4224511
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g449350 (1 of 1) PTHR11717//PTHR11717:SF2 - LOW MOLECULAR WEIGHT PROTEIN TYROSINE PHOSPHATASE // PEPTIDYL-TRNA HYDROLASE PTRHD1-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCACAAGCAGCTGGGGGATGCCGGATGGACGCTTATCAGCATGGGGACC
Internal bar code:TCTCAAGTTTGTAGAGGATTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:4552
LEAP-Seq percent confirming:9.375
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:58
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCTTCTGCTCGCTTGAGT
Suggested primer 2:TACAAGGACGAGCCCGAAAC