Insertion junction: CLIP2.072481_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.072481
Chromosome:chromosome 1
Location:6641283
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g047265 PHC52 (1 of 1) IPR000772//IPR003882//IPR024616 - Ricin B, lectin domain // Pistil-specific extensin-like protein // Pherophorin; Pherophorin-chlamydomonas homolog 52 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGATAAGTTGATATCGGTATGGCAGTGCTGAAAAGTGTTCGTGCAGGCAT
Internal bar code:CATGGCATTGGATGTGCTGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2694
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:ATCGCAACACCAAACCAACG
Suggested primer 2:GGGTACGTAACTGTGTGCCA