Insertion junction: CLIP2.072482_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.072482
Chromosome:chromosome 12
Location:234336
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g484950 outside_mRNA
Cre12.g485000 FAP182 (1 of 2) PTHR20899:SF1 - UPF0691 PROTEIN C9ORF116; Flagellar Associated Protein 182 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGTATCAGAAGGAAGCCGCTGTAAGCTACCTATATACAGTTGTGCTGA
Internal bar code:TTTAGTACATGTTAGTAACTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3327
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CTACAGCTCATCCTCGCAGG
Suggested primer 2:TTGTACGGACAGGTCGTGTG