Insertion junction: CLIP2.072486_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.072486
Chromosome:chromosome 7
Location:4405530
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g343101 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCGTTGCTTATATGCCGGTGCCGTATCGCAAATTCAAACTAACTAGTAT
Internal bar code:CTCGTATTATGCAGATCTACTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1578
LEAP-Seq percent confirming:65.3846
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCTGCCGCCATTTCTTTT
Suggested primer 2:CCTCGGGAGCCATTGTTTCT