Insertion junction: CLIP2.072497_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.072497
Chromosome:chromosome 7
Location:3557879
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g336600 AMD1,MAN1 (1 of 1) K01230 - mannosyl-oligosaccharide alpha-1,2-mannosidase (MAN1); Alpha-1%252C2-mannosidase I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCCCTACACCACAGGCACGATCCGCCGTGCATCTCATCTCCGCCGGCG
Internal bar code:GGATTGCCAATCTTCTGCGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1263
LEAP-Seq percent confirming:38.8889
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGATCCTGGAGCGGTACC
Suggested primer 2:TGGCCTAGTCAGTATGCCCT